BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027D11LP1|AL428725
(869 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig181 1491 0.0
>3x_Contig181
Length = 956
Score = 1491 bits (752), Expect = 0.0
Identities = 762/764 (99%), Gaps = 1/764 (0%)
Strand = Plus / Minus
Query: 1 gatctatattcagaaaaaccaataatgcatcaatactttttacgagtttgtgtttattcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 gatctatattcagaaaaaccaataatgcatcaatactttttacgagtttgtgtttattcc 705
Query: 61 tttgggttgtggtgttggtattggcaacattaccacctcctcgatctgtaccttttt-cg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 704 tttgggttgtggtgttggtattggcaacattaccacctcctcgatctgtaccttttttcg 645
Query: 120 tactgttctggatgattacggtaccacctatccacttccctccataaatcaaatacttta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tactgttctggatgattacggtaccacctatccacttccctccataaatcaaatacttta 585
Query: 180 ggatgttgcaaaaacgatggcaacaaccaactctcatctcttgcttgcctagacaatgtg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ggatgttgcaaaaacgatggcaacaaccaactctcatctcttgcttgcctagacaatgtg 525
Query: 240 actcttagatcccaggtagaattcaatgaacacaatacgaactcttcaccagcaacgttt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 actcttagatcccaggtagaattcaatgaacacaatacgaactcttcaccagcaacgttt 465
Query: 300 tccatgacagcattctccatactttgaatggtgttttttaatgaatgggtagcatcaata 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tccatgacagcattctccatactttgaatggtgttttttaatgaatgggtagcatcaata 405
Query: 360 gaatgtcttctggcttcttcccagatcggttttaacgtttccactgaaatgatctgatat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gaatgtcttctggcttcttcccagatcggttttaacgtttccactgaaatgatctgatat 345
Query: 420 gcaatagaagagatcattgtatgatctttcggagcttcctccgaataaaccgtttcacac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gcaatagaagagatcattgtatgatctttcggagcttcctccgaataaaccgtttcacac 285
Query: 480 tcgaataacacataaaacatagtgtttgagaatgattcttaaatttatatgacggtaatg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tcgaataacacataaaacatagtgtttgagaatgattcttaaatttatatgacggtaatg 225
Query: 540 gactctttgcgagagttataatgtacaggttcgtcaatgcaatgatattttatgatccat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 gactctttgcgagagttataatgtacaggttcgtcaatgcaatgatattttatgatccat 165
Query: 600 aaataaatttaaaatacagaataatactcagaaaacgctctggataaaacctctttataa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 aaataaatttaaaatacagaataatactcagaaaacgctctggataaaacctctttataa 105
Query: 660 ctaaatagccgatgtgtacactgtatcctgtttcagaccacttaacggttgtcagccggc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 ctaaatagccgatgtgtacactgtatcctgtttcagaccacttaacggttgtcagccggc 45
Query: 720 tgctttcacgatgtatttttacctcttaatcacttgtttctaac 763
|||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 44 tgctttcacgatgtatttttacctcttactcacttgtttctaac 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7495
Number of Sequences: 1807
Number of extensions: 7495
Number of successful extensions: 340
Number of sequences better than 1.0e-20: 1
length of query: 869
length of database: 10,358,551
effective HSP length: 16
effective length of query: 853
effective length of database: 10,329,639
effective search space: 8811182067
effective search space used: 8811182067
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)